ADCP处理软件CODAS安装 (conda方法安装)

夏威夷大学出品的ADCP处理软件，我主要用来查看船载ADCP流速数据。

1. 先安装conda(miniconda就可以)，这里不再赘述，安装完可以添加conda库和取消登录自动激活conda

conda config --add channels conda-forge # 添加库
conda config --set auto_activate_base false # 取消自动激活

2. 下载conda安装和创建环境的脚本并用conda安装

curl -O https://currents.soest.hawaii.edu/docs/adcp_doc/_downloads/1bbf9fe7142be462ef441b63cd6587a5/codas_processing_intel.yml
conda env create --file codas_processing_intel.yml
conda activate pycodas # 激活pycodas环境

3. 下载安装CODAS并配置相关数据

3.1 用Mercurial下载CODAS软件 (conda安装pycodas环境时已经配置了Mercurial)

mkdir ~/adcpcode
mkdir ~/adcpcode/programs
mkdir ~/adcpcode/topog
cd ~/adcpcode/programs
hg clone   https://currents.soest.hawaii.edu/hg/codas3
hg clone   https://currents.soest.hawaii.edu/hg/pycurrents
hg clone   https://currents.soest.hawaii.edu/hg/onship
hg clone   https://currents.soest.hawaii.edu/hg/uhdas

3.2 编译并安装CODAS

cd ~/adcpcode/programs/codas3
./waf configure --python_env
./waf build
./waf install
cd ~cd ~/adcpcode/programs/pycurrents
python ./runsetup.py
cd ../uhdas
python runsetup.py
cd ../onship
python setup.py install
cd ~

3.3 下载和安装示例文件

cd ~/adcpcode/programs
curl -O https://currents.soest.hawaii.edu/docs/zipped/adcp_doc.zip
unzip adcp_doc.zip
curl -O https://currents.soest.hawaii.edu/docs/zipped/codas_demos.zip
unzip codas_demos.zip

3.4 下载和安装地形文件

cd ~/adcpcode/topog
mkdir etopo
cd etopo
curl -O ftp://currents.soest.hawaii.edu/pub/outgoing/etopo1_for_pycurrents.zip
unzip etopo1_for_pycurrents.zipcd ~/miniconda3
ln -s ~/adcpcode/topog .
cd

4. 测试

cd ~/adcpcode/programs/codas_demos
cd uhdas_data/km1001c/proc/os38nb
showdb adcpdb/a_km # 输入 99 停止程序figview.py --type png #使用鼠标键选择上一张或下一张dataviewer.py # 查看某数据，关闭窗口即可停止

5. 使用Mercurial更新

拉取之后需要回到3.2部分重新编译安装，一般不用更新

cd codas3
hg pull -u   https://currents.soest.hawaii.edu/hg/codas3
cd ..cd pycurrents
hg pull -u    https://currents.soest.hawaii.edu/hg/pycurrents
cd ..cd onship
hg pull -u    https://currents.soest.hawaii.edu/hg/onship
cd ..cd uhdas
hg pull -u    https://currents.soest.hawaii.edu/hg/uhdas
cd ..

参考链接

https://currents.soest.hawaii.edu/docs/adcp_doc/codas_setup/anaconda_install/index.html